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Showing posts from September, 2020

Submitted ITasser

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 Abinezer Abebe STEAM Program I successfully submitted my sequence in to I-TASSER database and here are my results.

Protein Lab

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  Abinezer Abebe STEAM Program   Conserved domain found in cupin and related proteins A diverse protein domains superfamily which includes both metal-dependent and metal-independent enzymes, as well as catalytically inactive seed storage proteins   My protein is UniprotiP09923 ALPL(1x) also known as Intestinal -type alkaline phosphatase one of the most used database. No considered domain for this specific protein so I used the default.   My first result was Homo Sapiens Chromosomes 2 and I choose that data because it was most relevant.   LOCUS       NC_000002          242193529 bp    DNA     linear   CON 17-AUG-2020 DEFINITION  Homo sapiens chromosome 2, GRCh38.p13 Primary Assembly. ACCESSION   NC_000002 VERSION     NC_000002.12 DBLINK      BioProject: PRJNA168             Assembly: GCF_000001405.39 KEYWORDS    RefSeq. SOURCE      Homo sapiens (human)   ORGANISM  Homo sapiens             Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleos

9/13/2020

 Abinezer Abebe Hello my protein this semester is UniProt: P09923 ALPL the protein is a summation of phosphate monoester  and h20. The protein has co factors including Mg2 and Zn2. P09923 has binary interactions with 3 proteins including NT2NA _Human, KR109_Human and KR108_108_Human. The protein belongs to the alkaline Phosphate family. P09923 has a mass of 56,812 DA. Big component of the gut mucosal defense system and its job is to detoxify  lipopolysaccharide .